mcp_pykingenie documentation

Welcome to mcp_pykingenie, an MCP server for surface-based binding kinetics analysis using pykingenie. This server is intended only for surface-based binding data, such as Octet and Gator BLI experiments.

Contents:

• Installation
  • Requirements
  • Run with uvx
  • Install from PyPI
  • Install from Source
  • Run Tests
  • Build Documentation
• Usage
  • Video Demonstrations
  • Common MCP Configuration
  • Importing Data
  • Claude Desktop
  • ChatMCP Desktop
  • VS Code with GitHub Copilot
  • Developer Debugging
• Overview
  • Basic Workflow
  • Importing Data
  • MCP Tools
  • Example Chat Flow
  • Local Development
  • Citation
• MCP Tools Reference
  • Data Import
  • File Utilities
  • Experiment Inspection
  • Data Processing
  • Plotting
  • Fitting
• Local Testing
  • Prerequisites
  • Run all tests
  • Run a specific test
  • Inspect registered MCP tools
  • Test with MCP Inspector
• API Reference
  • Package
  • Command Line
  • Server State
  • MCP Server
  • Stdio Transport
  • Tools

Indices and tables

• Index

• Module Index

• Search Page